PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G332800.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 181aa    MW: 20078.5 Da    PI: 10.01
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G332800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.91.5e-12249454
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                       +h ++Er+RR+++N+ +  Lr+l P     + kK + a+i   A+e+Ik+L
  Aqcoe2G332800.1.p  2 SHIAVERNRRKQMNEHLKVLRSLTPCF---YIKKSDQASIIGGAIEFIKEL 49
                       89************************9...9******************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000839.47E-12154No hitNo description
PROSITE profilePS5088815.301149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.22E-16169IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.2E-13261IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.6E-9249IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.9E-11455IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009913Biological Processepidermal cell differentiation
GO:0010374Biological Processstomatal complex development
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    Send to blast
MSHIAVERNR RKQMNEHLKV LRSLTPCFYI KKSDQASIIG GAIEFIKELH QILQSLESKK  60
KRKSLSPSPV PSPRPIQLTP LPISPGTKNL KELGACCNSP VADVEAKISG SNVVLKVLSR  120
RNRGQITKIV AVLEKFSFEV LHLNISSMED TVLYSFVIKI GLECQLSVEE LALEVQQSFT  180
*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016557389.11e-98PREDICTED: transcription factor MUTE
SwissprotQ9M8K62e-85MUTE_ARATH; Transcription factor MUTE
TrEMBLK4AXQ03e-97K4AXQ0_SOLLC; Uncharacterized protein
STRINGSolyc01g080050.2.18e-97(Solanum lycopersicum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.15e-78bHLH family protein